A Python library which allows construction and manipulation of complex molecules, as well as automatic molecular design and the creation of molecular databases.
-
Updated
May 14, 2024 - Python
A Python library which allows construction and manipulation of complex molecules, as well as automatic molecular design and the creation of molecular databases.
phylogenetics tools for linux (and other mostly posix compliant) computers
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
Comparative Genomics Toolkit 3
A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)
Microbial Genome Circular plotting tool for comparative genomics using Circos
DFOIL: Introgression Testing for Five Taxa
A tool for plotting CAFE5 gene family expansion/contraction result
Workflow for identifying and classifying homologous gene/protein sequences
Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.
phylogenetic analyses informed by deep mutational scanning data
Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method
Program for estimating dN/dS in overlapping genes (OLGs)
Multisample Variant Format ToolKit
Computational Biology & Bioinformatics Resources
A curated list of awesome Molecular Modeling And Drug Discovery 🔥
An R package to identify and classify duplicated genes from whole-genome protein sequence data
Program for simulating non-reversible DNA sequence evolution on a fixed bifurcating tree using trinucleotide context
R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecular data. Those will be introduced during the course.
Add a description, image, and links to the molecular-evolution topic page so that developers can more easily learn about it.
To associate your repository with the molecular-evolution topic, visit your repo's landing page and select "manage topics."