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501 Open 7,119 Closed
501 Open 7,119 Closed
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Issues list

Editting Seurat Object metadata
#9000 opened Jun 9, 2024 by HappinessEricst
Uncertain workflow for differential expression testing after SC Transform v2 + Harmony integration using IntegrateLayers bug Something isn't working
#8998 opened Jun 7, 2024 by jcm6t
1
How to use high res image in Visium HD
#8996 opened Jun 7, 2024 by DaiZYlab
1
RCTD celltype result to full: wrong weights matrix input
#8995 opened Jun 7, 2024 by sunkunkun
How can I merge RDS data for specific clusters in multiple samples after removing batches？
#8994 opened Jun 7, 2024 by JWJ13164328557
CalcPerturbSig error with nn2
#8990 opened Jun 6, 2024 by mangochiral
uma application bug Something isn't working more-information-needed We need more information before this can be addressed
#8989 opened Jun 6, 2024 by MrsJae
2
FindTransferAnchors fail with caught segfault 'memory not mapped' bug Something isn't working
#8987 opened Jun 5, 2024 by r-melo
Question on sctransform and cell cycle score regression in Seurat v5
#8986 opened Jun 5, 2024 by sg3451
Error in validObject(.Object) : invalid class “LowRankMatrix” object: the supplied seed must support extract_array() bug Something isn't working
#8985 opened Jun 5, 2024 by yinshanfang
how to change the size of the circles in the legend of SpatialDimPlot?
#8984 opened Jun 5, 2024 by biobug16
Error in SpatialDimPlot() : could not find function "SpatialDimPlot"
#8983 opened Jun 5, 2024 by Anna-RNA88
SpatialFeaturePlot cannot output features
#8982 opened Jun 5, 2024 by liziyie
3
MapQuery Error: Cannot find assay '' in this Seurat object
#8981 opened Jun 5, 2024 by MiJieEr
2
FindNeighbors have different results for RNA and SCT assays bug Something isn't working
#8980 opened Jun 4, 2024 by kellyliyichen
Dropping ALL VariableFeatures using VariableFeatures(so) <- NULL not working bug Something isn't working
#8978 opened Jun 4, 2024 by JackieMium
Beginner: need help with PCA and generating plot
#8976 opened Jun 4, 2024 by aigerim2398
Missing parallelization docs for v5? documentation Error in documentation
#8975 opened Jun 4, 2024 by nick-youngblut
To Join or not to join- a v5 dilemma
#8972 opened Jun 3, 2024 by Sharanrjk
2
Merge different Seurat objects remove an assay
#8970 opened Jun 3, 2024 by Elham-adabi
Stereo-Seq Analysis Pipeline enhancement New feature or request
#8969 opened Jun 3, 2024 by TdzBAS
1
genes analysis
#8968 opened Jun 3, 2024 by Osam82
Where is integrated assay in Seurat v5
#8967 opened Jun 2, 2024 by tewengtong
Visium Voxels Don't Load Properly on Combined Seurat Object using Seurat v5.1.0 bug Something isn't working
#8964 opened May 31, 2024 by TeodoraTockovska
5
Change colors in CellScater plot
#8962 opened May 31, 2024 by nina-hahn
ProTip! Updated in the last three days: updated:>2024-06-06.