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Project includes an R pipeline created using Bioconductor and Seurat to preprocess and clean scRNA sequence datasets, perform Principal Component Analysis and identify anomalous differential gene expression.(In Progress)

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Vedant-S/Single-Cell-RNA-Sequence-Analysis_Cancer

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Single Cell RNA Sequence Data Analysis in Cancerous Tumours:


  • Used single cell RNA sequencing databases in cancerous tumours from various tissues (oral, breast) to identify the anomalous differential levels of gene expression due to excess cell division.

  • Created an R pipeline using FastQC, Bioconductor and Seurat to preprocess and clean single cell RNA sequence datasets, perform Principal Component Analysis and identify anomalous differential gene expression.

  • Used the PARAM-ISHAN Supercomputer to perform biocomputational calculations on the breast tissue scRNA sequence database.


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+ Vedant Shrivastava | vedantshrivastava466@gmail.com

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Project includes an R pipeline created using Bioconductor and Seurat to preprocess and clean scRNA sequence datasets, perform Principal Component Analysis and identify anomalous differential gene expression.(In Progress)

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