Whole-Genome Binding Locations Viewer of Human p53
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Updated
Dec 10, 2022 - JavaScript
Whole-Genome Binding Locations Viewer of Human p53
Computer Science B.Sc thesis paper and final stage experience. Approaching a Computational Biology Problem with integer linear programming tools.
📦 🔬 R/methyvim: Targeted, Robust, and Model-free Differential Methylation Analysis
TCR Enrichment Analysis (TEA) Webtool
Human sinoatrial node computational anatomy repository.
Research project undertaken in Computational Genomics at the University of Pittsburgh. with Dr. Miler Lee and students to understand Maternal-to-Zygotic transition in Xenopus laevis
This repository contains all the codes for graphical and numerical characterisation of nucleotide and amino acid sequences based on Nandy-graphical system for allotting coordinate axes to the nucleotide bases or amino acids. The repository also contains code to determine the solvent accessibility and degree of conservation for every 12-length co…
Stochastic simulator of mitochondria represented as a dynamic spaceless graph
a mathematica implementation of the cellular-potts model
PteraControls is a tool for designing control systems for flapping wing vehicles.
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Parser that reassembles sequence from NetSurfp csv output file.
Tool to design gRNAs
The generation of a kmers dataset that is associated with multiple gene sequences and the further manipulation of this generated dataset are the main contents of the current project.
Generates values and graphs to determine significant proteins in pathways given proteomic data. Created for use at JBEI laboratories.
Knowles Lab Research: determine which genetic variants cause a phenotype with non-binary functional annotations
Use Azure OpenAI and Azure Machine Learning Studio to create a GPT model with a genomics context. This example allows for ChatGPT-like chat interactivity with variant information (from modified VCF data).
A little book about bioinformatics. Continually in progress
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