Side project to find jointly accessible regions in pairs of celltypes
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Updated
Jan 25, 2018 - Shell
Side project to find jointly accessible regions in pairs of celltypes
ATAC-Seq Transcription Factor Footprint Discovery and Analysis
Transcriptional and epigenetic signature of muscle tissue cells linked to atrophy
Batch annotation and visualization of the peaks identified from ChIP-seq, ChIP-chip, ATAC-seq experiments or any experiments resulted in large number of chromosome ranges
Nazzari, et al. (2023) 'Investigation of the effects of phthalates on in vitro thyroid models with RNA-Seq and ATAC-Seq'
An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.
Determining reproducibility of Epigenomic signal for Answer ALS
Python scripts necessary to reproduce ATAC-seq and RNA-seq analysis in Biotagging manuscript
scripts for scRNA-Seq/scATAC-Seq
reports generated by ataqv for Gaulton lab ATAC data
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